Search Workflows
Whole Genome Variant Calling
Call small and structural variants using Oxford Nanopore data.
alignment long-read mtDNA structural variants variants
Sentieon Somatic Variant Calling
Compare tumor/normal samples and call somatic variants using Sentieon.
alignment normal tumor variants
Sentieon Germline Whole Genome Sequencing Analysis
Align reads to the reference genome, call variants, and calculate quality metrics using Sentieon.
alignment germline variants wgs
Sentieon Long Read Germline Whole Genome Sequencing Analysis
Perform alignment and variant calling for SNPs, small indels, and structural variants using Sentieon.
alignment fastq long-read sentieon variants wgs
DRAGEN - Variant Calling and Filtering
DRAGEN functional equivalence discovery and filtering of SNPs and indels.
dragen filtering variants
DRAGEN - Whole Genome Germline Single Sample Analysis
DRAGEN functional equivalence germline SNP and indel discovery in human whole genome sequencing data.
dragen
Drug Resistance Marker Detection
Generate a report summarizing drug resistance markers detected in a given set of variant calls.
annotation drug-resistance long-read variants
Metagenome-Assembled Genomes
Identify high-quality metagenome-assembled genomes (MAGs) from PacBio HiFi data.
assembly hifi mag metagenomics
IsoSeq Isoform Discovery
Identify transcripts in PacBio single-molecule sequencing data.
genome hifi isoform single-cell
HiFi Target Enrichment
Analyze targeted HiFi sequence datasets using PacBio read data. Call and phase small and structural variants.
alignment fastq genome hifi
Human de novo Assembly
Generate de novo assemblies from PacBio read data. Supports single-sample and trio-based assemblies.
alignment fastq genome hifi
Whole Genome Sequencing Variant Pipeline
Analyze human PacBio whole genome sequencing (WGS) data to produce sequence alignment and variant calls for a sample or cohort.
alignment fastq genome hifi